Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gm7783-201ENSMUST00000204795 781 ntBASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lrif1Q8CDD9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm11439-201ENSMUST00000118598 409 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm11222-201ENSMUST00000119005 738 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm13297-201ENSMUST00000120205 934 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm27516-201ENSMUST00000184237 98 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm45930-201ENSMUST00000221330 292 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Cts7-204ENSMUST00000225321 1257 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms