Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.72□□□□□ -0.21
Shisa4Q8CA71 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Gm10051-201ENSMUST00000145209 414 ntBASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Gm25951-201ENSMUST00000175330 64 ntBASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.71□□□□□ -0.21
Shisa4Q8CA71 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa4Q8CA71 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa4Q8CA71 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa4Q8CA71 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa4Q8CA71 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Shisa4Q8CA71 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.71□□□□□ -0.22
Shisa4Q8CA71 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa4Q8CA71 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa4Q8CA71 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa4Q8CA71 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm13047-201ENSMUST00000117116 815 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm12795-201ENSMUST00000117594 539 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm14071-201ENSMUST00000117817 509 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm14460-201ENSMUST00000121511 639 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm3150-201ENSMUST00000166418 204 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm10807-201ENSMUST00000177134 795 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm10774-201ENSMUST00000188689 204 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms