Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Gm11509-201ENSMUST00000117358 325 ntBASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Gm45433-201ENSMUST00000209386 247 ntBASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Gm4157-201ENSMUST00000211647 679 ntBASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Gm14130-201ENSMUST00000118417 987 ntBASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Gm26083-201ENSMUST00000157904 193 ntBASIC12.21□□□□□ -0.45
Trub1Q8C0D0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Gm9797-202ENSMUST00000218003 294 ntBASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trub1Q8C0D0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trub1Q8C0D0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trub1Q8C0D0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trub1Q8C0D0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trub1Q8C0D0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trub1Q8C0D0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trub1Q8C0D0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trub1Q8C0D0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trub1Q8C0D0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Gm24749-201ENSMUST00000157838 343 ntBASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Gm7003-201ENSMUST00000195089 312 ntBASIC12.2□□□□□ -0.46
Trub1Q8C0D0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms