Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm6082-201ENSMUST00000215204 454 ntBASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm18165-201ENSMUST00000217426 928 ntBASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trerf1Q8BXJ2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm14832-201ENSMUST00000121289 322 ntBASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm44958-201ENSMUST00000203734 736 ntBASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trerf1Q8BXJ2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trerf1Q8BXJ2 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Trerf1Q8BXJ2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trerf1Q8BXJ2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trerf1Q8BXJ2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms