Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp1Q8BJQ2 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.66□□□□□ -0.38
Usp1Q8BJQ2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp1Q8BJQ2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Usp1Q8BJQ2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Gm15595-201ENSMUST00000120840 961 ntBASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Gm7600-201ENSMUST00000209657 785 ntBASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp1Q8BJQ2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usp1Q8BJQ2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm15004-201ENSMUST00000119192 630 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm11246-201ENSMUST00000120880 345 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm9540-201ENSMUST00000188230 478 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm29499-201ENSMUST00000189151 486 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm28329-201ENSMUST00000191208 689 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm29171-201ENSMUST00000191397 486 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm18893-201ENSMUST00000198416 943 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm2553-201ENSMUST00000215986 605 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp1Q8BJQ2 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Gm14585-201ENSMUST00000120713 634 ntBASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.63□□□□□ -0.39
Usp1Q8BJQ2 Gm8737-201ENSMUST00000122208 642 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms