Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Gm23931-201ENSMUST00000103842 109 ntBASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Gm42627-201ENSMUST00000197347 224 ntBASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Gm43133-201ENSMUST00000197472 463 ntBASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm11425-201ENSMUST00000119608 498 ntBASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm9396-201ENSMUST00000076703 567 ntBASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chmp2bQ8BJF9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp2bQ8BJF9 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp2bQ8BJF9 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp2bQ8BJF9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp2bQ8BJF9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Chmp2bQ8BJF9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Btrc-209ENSMUST00000224478 2194 ntBASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms