Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ubfd1Q78JW9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubfd1Q78JW9 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ubfd1Q78JW9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubfd1Q78JW9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ubfd1Q78JW9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ubfd1Q78JW9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubfd1Q78JW9 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.57□□□□□ -0.56
Ubfd1Q78JW9 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm11783-201ENSMUST00000119549 885 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm7467-201ENSMUST00000185173 652 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm28937-201ENSMUST00000185413 695 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm29400-201ENSMUST00000187208 695 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm28662-201ENSMUST00000188446 695 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm28251-201ENSMUST00000188835 695 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm37318-201ENSMUST00000194325 695 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm38017-201ENSMUST00000194768 695 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm37287-201ENSMUST00000195449 695 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm37793-201ENSMUST00000195548 695 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gm10179-201ENSMUST00000086233 688 ntBASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ubfd1Q78JW9 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm22920-201ENSMUST00000102175 109 ntBASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm15352-201ENSMUST00000118696 270 ntBASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm8737-201ENSMUST00000122208 642 ntBASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm17391-201ENSMUST00000171036 126 ntBASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm19459-201ENSMUST00000176240 835 ntBASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Gm7940-201ENSMUST00000218195 769 ntBASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms