Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Gm38344-201ENSMUST00000195306 1353 ntBASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Gm7069-201ENSMUST00000182418 1008 ntBASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC17.94■□□□□ 0.46
Slx4Q6P1D7 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC17.94■□□□□ 0.46
Slx4Q6P1D7 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Gm31274-201ENSMUST00000197356 229 ntBASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Rps3a2-201ENSMUST00000074245 792 ntBASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Rps3a3-201ENSMUST00000074680 795 ntBASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slx4Q6P1D7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Mir453-201ENSMUST00000104732 82 ntBASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 AC164087.2-201ENSMUST00000216206 1072 ntBASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Gm5513-201ENSMUST00000072982 1218 ntBASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.93■□□□□ 0.46
Slx4Q6P1D7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Gm44106-201ENSMUST00000203153 1599 ntBASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Gm16547-201ENSMUST00000159474 293 ntBASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Gm7192-201ENSMUST00000210793 1137 ntBASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 AC154759.1-201ENSMUST00000224137 1159 ntBASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Lect2-202ENSMUST00000225183 823 ntBASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Gm20554-201ENSMUST00000177421 2352 ntBASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Slx4Q6P1D7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms