Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm15370-201ENSMUST00000117158 253 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm12742-201ENSMUST00000117326 410 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm12957-201ENSMUST00000117835 377 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm13297-201ENSMUST00000120205 934 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm17420-201ENSMUST00000164753 153 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm9230-201ENSMUST00000188228 532 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 AY702102-202ENSMUST00000194651 1173 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm30285-201ENSMUST00000214614 422 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Gm9823-201ENSMUST00000051212 327 ntBASIC9.03□□□□□ -0.96
Zfp248Q640N4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zfp248Q640N4 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Zfp248Q640N4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm11222-201ENSMUST00000119005 738 ntBASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm15547-201ENSMUST00000122152 333 ntBASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm18054-201ENSMUST00000207539 555 ntBASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm18935-201ENSMUST00000212692 664 ntBASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.02□□□□□ -0.97
Zfp248Q640N4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms