Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Gm28882-201ENSMUST00000185504 314 ntBASIC11.32□□□□□ -0.6
Nr1h4Q60641 Gm9136-201ENSMUST00000193368 454 ntBASIC11.32□□□□□ -0.6
Nr1h4Q60641 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.32□□□□□ -0.6
Nr1h4Q60641 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.32□□□□□ -0.6
Nr1h4Q60641 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.32□□□□□ -0.6
Nr1h4Q60641 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.32□□□□□ -0.6
Nr1h4Q60641 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.32□□□□□ -0.6
Nr1h4Q60641 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.31□□□□□ -0.6
Nr1h4Q60641 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.31□□□□□ -0.6
Nr1h4Q60641 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.31□□□□□ -0.6
Nr1h4Q60641 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.31□□□□□ -0.6
Nr1h4Q60641 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.31□□□□□ -0.6
Nr1h4Q60641 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.31□□□□□ -0.6
Nr1h4Q60641 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nr1h4Q60641 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms