Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Syt7-204ENSMUST00000223586 1344 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Gm17980-201ENSMUST00000217977 2349 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Gm22189-201ENSMUST00000103822 86 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Gm6983-201ENSMUST00000214912 628 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 AC154687.2-201ENSMUST00000223853 640 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 AC132317.1-201ENSMUST00000227227 962 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Itm2b-204ENSMUST00000228637 783 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Gm10040-201ENSMUST00000080726 1662 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav3-3Q5R1C3 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Gm6447-201ENSMUST00000118905 835 ntBASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Gm14057-201ENSMUST00000120631 482 ntBASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Gm18307-201ENSMUST00000206864 949 ntBASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav3-3Q5R1C3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms