Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Vps13aQ5H8C4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Vps13aQ5H8C4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps13aQ5H8C4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps13aQ5H8C4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Vps13aQ5H8C4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gm15197-201ENSMUST00000120526 478 ntBASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gm4705-201ENSMUST00000177415 354 ntBASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gm45090-201ENSMUST00000208775 1148 ntBASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps13aQ5H8C4 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gm42751-201ENSMUST00000198065 559 ntBASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gm23912-201ENSMUST00000104687 87 ntBASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gm7445-201ENSMUST00000192115 340 ntBASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gm5292-201ENSMUST00000073317 580 ntBASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps13aQ5H8C4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Gm16210-201ENSMUST00000122161 610 ntBASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Gm5529-201ENSMUST00000165691 891 ntBASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Gm43117-201ENSMUST00000198531 379 ntBASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13aQ5H8C4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Vps13aQ5H8C4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13aQ5H8C4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13aQ5H8C4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13aQ5H8C4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13aQ5H8C4 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13aQ5H8C4 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Vps13aQ5H8C4 Gm22937-201ENSMUST00000103954 131 ntBASIC11.39□□□□□ -0.59
Vps13aQ5H8C4 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms