Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.71□□□□□ -0.85
Trim63Q38HM4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Mir686-201ENSMUST00000102174 109 ntBASIC9.71□□□□□ -0.86
Trim63Q38HM4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gm7862-201ENSMUST00000121461 292 ntBASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gm10060-201ENSMUST00000212002 111 ntBASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.71□□□□□ -0.86
Trim63Q38HM4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.71□□□□□ -0.86
Trim63Q38HM4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.71□□□□□ -0.86
Trim63Q38HM4 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim63Q38HM4 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm43488-201ENSMUST00000198874 2504 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm9103-201ENSMUST00000119371 405 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm27772-201ENSMUST00000184900 187 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm38297-201ENSMUST00000195122 1057 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm19324-201ENSMUST00000213229 1169 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm37373-201ENSMUST00000194005 2812 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms