Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.96□□□□□ -0.82
Npas1P97459 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Npas1P97459 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Npas1P97459 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Npas1P97459 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Npas1P97459 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Npas1P97459 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.95□□□□□ -0.82
Npas1P97459 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Npas1P97459 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.95□□□□□ -0.82
Npas1P97459 Gm11964-201ENSMUST00000120982 444 ntBASIC9.95□□□□□ -0.82
Npas1P97459 Gm2231-201ENSMUST00000125661 612 ntBASIC9.95□□□□□ -0.82
Npas1P97459 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.95□□□□□ -0.82
Npas1P97459 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.95□□□□□ -0.82
Npas1P97459 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.95□□□□□ -0.82
Npas1P97459 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Npas1P97459 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.95□□□□□ -0.82
Npas1P97459 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Npas1P97459 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.95□□□□□ -0.82
Npas1P97459 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.95□□□□□ -0.82
Npas1P97459 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.95□□□□□ -0.82
Npas1P97459 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Npas1P97459 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Npas1P97459 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Npas1P97459 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Npas1P97459 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.94□□□□□ -0.82
Npas1P97459 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.94□□□□□ -0.82
Npas1P97459 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.94□□□□□ -0.82
Npas1P97459 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Gm11597-201ENSMUST00000121423 964 ntBASIC9.94□□□□□ -0.82
Npas1P97459 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Npas1P97459 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms