Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.64□□□□□ -0.39
NrlP54846 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.64□□□□□ -0.39
NrlP54846 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.64□□□□□ -0.39
NrlP54846 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.64□□□□□ -0.39
NrlP54846 Gm25072-201ENSMUST00000175233 235 ntBASIC12.64□□□□□ -0.39
NrlP54846 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.64□□□□□ -0.39
NrlP54846 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.64□□□□□ -0.39
NrlP54846 Gm37905-201ENSMUST00000195310 341 ntBASIC12.64□□□□□ -0.39
NrlP54846 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.64□□□□□ -0.39
NrlP54846 Gm44980-201ENSMUST00000205826 314 ntBASIC12.64□□□□□ -0.39
NrlP54846 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.64□□□□□ -0.39
NrlP54846 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.64□□□□□ -0.39
NrlP54846 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.64□□□□□ -0.39
NrlP54846 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.64□□□□□ -0.39
NrlP54846 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.64□□□□□ -0.39
NrlP54846 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
NrlP54846 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
NrlP54846 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
NrlP54846 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NrlP54846 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
NrlP54846 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.64□□□□□ -0.39
NrlP54846 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.64□□□□□ -0.39
NrlP54846 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NrlP54846 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Gm15207-201ENSMUST00000119259 442 ntBASIC12.63□□□□□ -0.39
NrlP54846 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.63□□□□□ -0.39
NrlP54846 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Mir8115-201ENSMUST00000184992 119 ntBASIC12.63□□□□□ -0.39
NrlP54846 Gm9645-201ENSMUST00000197131 792 ntBASIC12.63□□□□□ -0.39
NrlP54846 Gm43186-201ENSMUST00000198130 824 ntBASIC12.63□□□□□ -0.39
NrlP54846 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.63□□□□□ -0.39
NrlP54846 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
NrlP54846 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.63□□□□□ -0.39
NrlP54846 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.63□□□□□ -0.39
NrlP54846 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.63□□□□□ -0.39
NrlP54846 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NrlP54846 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.62□□□□□ -0.39
NrlP54846 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.62□□□□□ -0.39
NrlP54846 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.62□□□□□ -0.39
NrlP54846 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.62□□□□□ -0.39
NrlP54846 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NrlP54846 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Gm12579-201ENSMUST00000118040 783 ntBASIC12.62□□□□□ -0.39
NrlP54846 Gm8731-201ENSMUST00000118088 412 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms