Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Pdx1P52946 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.72□□□□□ -0.53
Pdx1P52946 Gm14028-201ENSMUST00000117434 479 ntBASIC11.72□□□□□ -0.53
Pdx1P52946 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pdx1P52946 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.72□□□□□ -0.53
Pdx1P52946 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pdx1P52946 Mir7677-201ENSMUST00000184226 67 ntBASIC11.72□□□□□ -0.53
Pdx1P52946 Gm28686-201ENSMUST00000187404 609 ntBASIC11.72□□□□□ -0.53
Pdx1P52946 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.72□□□□□ -0.53
Pdx1P52946 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.72□□□□□ -0.53
Pdx1P52946 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.72□□□□□ -0.53
Pdx1P52946 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.72□□□□□ -0.53
Pdx1P52946 Gm807-202ENSMUST00000224929 408 ntBASIC11.72□□□□□ -0.53
Pdx1P52946 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.72□□□□□ -0.53
Pdx1P52946 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdx1P52946 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.71□□□□□ -0.53
Pdx1P52946 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pdx1P52946 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pdx1P52946 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.71□□□□□ -0.53
Pdx1P52946 Gm23596-201ENSMUST00000104304 132 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.71□□□□□ -0.53
Pdx1P52946 Gm4310-201ENSMUST00000177847 889 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Gm6114-201ENSMUST00000182472 968 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Gm28450-201ENSMUST00000187349 638 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Gm29199-201ENSMUST00000187766 775 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Gm3332-201ENSMUST00000189337 928 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Pdx1P52946 Gm18730-201ENSMUST00000218038 343 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pdx1P52946 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdx1P52946 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.71□□□□□ -0.53
Pdx1P52946 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.71□□□□□ -0.53
Pdx1P52946 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.71□□□□□ -0.54
Pdx1P52946 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.71□□□□□ -0.54
Pdx1P52946 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pdx1P52946 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.71□□□□□ -0.54
Pdx1P52946 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdx1P52946 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pdx1P52946 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.7□□□□□ -0.54
Pdx1P52946 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms