Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Lhx3P50481 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Lhx3P50481 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.99□□□□□ -0.49
Lhx3P50481 Gm10774-201ENSMUST00000188689 204 ntBASIC11.99□□□□□ -0.49
Lhx3P50481 Gm18753-201ENSMUST00000201000 566 ntBASIC11.99□□□□□ -0.49
Lhx3P50481 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.99□□□□□ -0.49
Lhx3P50481 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Nsd1-205ENSMUST00000224693 852 ntBASIC11.99□□□□□ -0.49
Lhx3P50481 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.99□□□□□ -0.49
Lhx3P50481 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.99□□□□□ -0.49
Lhx3P50481 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.99□□□□□ -0.49
Lhx3P50481 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx3P50481 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Lhx3P50481 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx3P50481 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Lhx3P50481 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx3P50481 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lhx3P50481 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Lhx3P50481 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Lhx3P50481 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Lhx3P50481 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lhx3P50481 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lhx3P50481 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lhx3P50481 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.98□□□□□ -0.49
Lhx3P50481 Gm10051-201ENSMUST00000145209 414 ntBASIC11.98□□□□□ -0.49
Lhx3P50481 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.98□□□□□ -0.49
Lhx3P50481 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.98□□□□□ -0.49
Lhx3P50481 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.98□□□□□ -0.49
Lhx3P50481 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Gm29499-201ENSMUST00000189151 486 ntBASIC11.98□□□□□ -0.49
Lhx3P50481 Gm28329-201ENSMUST00000191208 689 ntBASIC11.98□□□□□ -0.49
Lhx3P50481 Gm29171-201ENSMUST00000191397 486 ntBASIC11.98□□□□□ -0.49
Lhx3P50481 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lhx3P50481 Gm44100-201ENSMUST00000204329 436 ntBASIC11.98□□□□□ -0.49
Lhx3P50481 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Lhx3P50481 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.98□□□□□ -0.49
Lhx3P50481 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx3P50481 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.97□□□□□ -0.49
Lhx3P50481 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Lhx3P50481 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Lhx3P50481 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lhx3P50481 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lhx3P50481 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx3P50481 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lhx3P50481 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms