Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Prox1P48437 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Prox1P48437 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Prox1P48437 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Prox1P48437 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.4□□□□□ -0.58
Prox1P48437 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.4□□□□□ -0.58
Prox1P48437 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.4□□□□□ -0.58
Prox1P48437 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Prox1P48437 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.4□□□□□ -0.58
Prox1P48437 Gm23119-201ENSMUST00000158610 140 ntBASIC11.4□□□□□ -0.58
Prox1P48437 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.4□□□□□ -0.58
Prox1P48437 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.4□□□□□ -0.58
Prox1P48437 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Prox1P48437 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.4□□□□□ -0.58
Prox1P48437 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.4□□□□□ -0.58
Prox1P48437 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
Prox1P48437 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Prox1P48437 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Prox1P48437 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Prox1P48437 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Prox1P48437 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Prox1P48437 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Prox1P48437 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Prox1P48437 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Prox1P48437 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Prox1P48437 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.39□□□□□ -0.59
Prox1P48437 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Gm12314-201ENSMUST00000118104 538 ntBASIC11.39□□□□□ -0.59
Prox1P48437 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Prox1P48437 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Gm27682-201ENSMUST00000183930 110 ntBASIC11.39□□□□□ -0.59
Prox1P48437 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.39□□□□□ -0.59
Prox1P48437 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.39□□□□□ -0.59
Prox1P48437 Gm43818-201ENSMUST00000200605 466 ntBASIC11.39□□□□□ -0.59
Prox1P48437 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.39□□□□□ -0.59
Prox1P48437 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Prox1P48437 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Prox1P48437 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms