Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Gm2991-201ENSMUST00000173338 480 ntBASIC12.05□□□□□ -0.48
Vps4bP46467 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.05□□□□□ -0.48
Vps4bP46467 Gm2383-201ENSMUST00000181461 807 ntBASIC12.05□□□□□ -0.48
Vps4bP46467 Gm6114-201ENSMUST00000182472 968 ntBASIC12.05□□□□□ -0.48
Vps4bP46467 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.05□□□□□ -0.48
Vps4bP46467 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.05□□□□□ -0.48
Vps4bP46467 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Vps4bP46467 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps4bP46467 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Gm12015-201ENSMUST00000117065 843 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm15370-201ENSMUST00000117158 253 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm11989-201ENSMUST00000117240 672 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm11362-201ENSMUST00000118838 850 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm7722-201ENSMUST00000120646 741 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm12164-201ENSMUST00000121695 551 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm14441-201ENSMUST00000121960 540 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm15547-201ENSMUST00000122152 333 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps4bP46467 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps4bP46467 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps4bP46467 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps4bP46467 Gm20482-202ENSMUST00000174729 825 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.04□□□□□ -0.48
Vps4bP46467 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps4bP46467 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps4bP46467 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vps4bP46467 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vps4bP46467 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.04□□□□□ -0.48
Vps4bP46467 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vps4bP46467 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps4bP46467 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.03□□□□□ -0.48
Vps4bP46467 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vps4bP46467 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vps4bP46467 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.03□□□□□ -0.48
Vps4bP46467 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Vps4bP46467 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.03□□□□□ -0.48
Vps4bP46467 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vps4bP46467 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.03□□□□□ -0.48
Vps4bP46467 Gm18893-201ENSMUST00000198416 943 ntBASIC12.03□□□□□ -0.48
Vps4bP46467 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.03□□□□□ -0.48
Vps4bP46467 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Gm30285-201ENSMUST00000214614 422 ntBASIC12.03□□□□□ -0.48
Vps4bP46467 Gm6082-201ENSMUST00000215204 454 ntBASIC12.03□□□□□ -0.48
Vps4bP46467 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.03□□□□□ -0.48
Vps4bP46467 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.03□□□□□ -0.48
Vps4bP46467 Gm8712-201ENSMUST00000221090 701 ntBASIC12.03□□□□□ -0.48
Vps4bP46467 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms