Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm29755-201ENSMUST00000196976 948 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sox18P43680 Gm6562-201ENSMUST00000221903 464 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sox18P43680 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sox18P43680 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Sox18P43680 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sox18P43680 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sox18P43680 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Sox18P43680 Gm26013-201ENSMUST00000104404 119 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Gm13916-201ENSMUST00000117368 628 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Gm13549-201ENSMUST00000118339 796 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Gm14603-201ENSMUST00000121275 448 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox18P43680 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Gm8582-201ENSMUST00000164061 789 ntBASIC11.6□□□□□ -0.55
Sox18P43680 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox18P43680 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.6□□□□□ -0.55
Sox18P43680 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sox18P43680 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sox18P43680 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox18P43680 Trbv27-201ENSMUST00000193711 277 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox18P43680 Gm43186-201ENSMUST00000198130 824 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox18P43680 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox18P43680 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox18P43680 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 AC134439.1-201ENSMUST00000220923 600 ntBASIC11.6□□□□□ -0.55
Sox18P43680 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.6□□□□□ -0.55
Sox18P43680 AC242269.1-201ENSMUST00000227020 741 ntBASIC11.6□□□□□ -0.55
Sox18P43680 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox18P43680 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Sox18P43680 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sox18P43680 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Sox18P43680 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Sox18P43680 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Sox18P43680 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox18P43680 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.59□□□□□ -0.55
Sox18P43680 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sox18P43680 Gm15036-201ENSMUST00000118880 400 ntBASIC11.59□□□□□ -0.55
Sox18P43680 Gm14791-201ENSMUST00000119061 1166 ntBASIC11.59□□□□□ -0.55
Sox18P43680 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.59□□□□□ -0.55
Sox18P43680 Gm12990-201ENSMUST00000120372 468 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms