Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
HttP42859 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
HttP42859 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.21□□□□□ -0.45
HttP42859 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.21□□□□□ -0.45
HttP42859 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HttP42859 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HttP42859 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HttP42859 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HttP42859 Gm3945-201ENSMUST00000196637 683 ntBASIC12.21□□□□□ -0.46
HttP42859 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.21□□□□□ -0.46
HttP42859 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HttP42859 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
HttP42859 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
HttP42859 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.2□□□□□ -0.46
HttP42859 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
HttP42859 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.2□□□□□ -0.46
HttP42859 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC12.2□□□□□ -0.46
HttP42859 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.2□□□□□ -0.46
HttP42859 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.2□□□□□ -0.46
HttP42859 H2afy3-201ENSMUST00000151919 1112 ntBASIC12.2□□□□□ -0.46
HttP42859 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.2□□□□□ -0.46
HttP42859 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
HttP42859 AC192333.3-201ENSMUST00000224041 463 ntBASIC12.2□□□□□ -0.46
HttP42859 AC153153.1-201ENSMUST00000225803 793 ntBASIC12.2□□□□□ -0.46
HttP42859 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
HttP42859 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
HttP42859 Gm16477-201ENSMUST00000085365 801 ntBASIC12.2□□□□□ -0.46
HttP42859 Gm17415-201ENSMUST00000096427 789 ntBASIC12.2□□□□□ -0.46
HttP42859 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Gm13456-201ENSMUST00000118928 1365 ntBASIC12.2□□□□□ -0.46
HttP42859 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HttP42859 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC12.2□□□□□ -0.46
HttP42859 Gm37723-201ENSMUST00000194480 565 ntBASIC12.2□□□□□ -0.46
HttP42859 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC12.2□□□□□ -0.46
HttP42859 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.19□□□□□ -0.46
HttP42859 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
HttP42859 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.19□□□□□ -0.46
HttP42859 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.19□□□□□ -0.46
HttP42859 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.19□□□□□ -0.46
HttP42859 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.19□□□□□ -0.46
HttP42859 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
HttP42859 Gm28671-201ENSMUST00000187036 692 ntBASIC12.19□□□□□ -0.46
HttP42859 Gm44908-201ENSMUST00000208610 266 ntBASIC12.19□□□□□ -0.46
HttP42859 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Gm16165-201ENSMUST00000160140 795 ntBASIC12.19□□□□□ -0.46
HttP42859 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HttP42859 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms