Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Vcam1P29533 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.59□□□□□ -0.23
Vcam1P29533 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.59□□□□□ -0.23
Vcam1P29533 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vcam1P29533 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vcam1P29533 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vcam1P29533 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Vcam1P29533 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vcam1P29533 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.58□□□□□ -0.24
Vcam1P29533 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.58□□□□□ -0.24
Vcam1P29533 Gm12247-201ENSMUST00000117585 670 ntBASIC13.58□□□□□ -0.24
Vcam1P29533 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.58□□□□□ -0.24
Vcam1P29533 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.58□□□□□ -0.24
Vcam1P29533 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Gm5100-201ENSMUST00000195631 589 ntBASIC13.58□□□□□ -0.24
Vcam1P29533 Gm45594-201ENSMUST00000211717 241 ntBASIC13.58□□□□□ -0.24
Vcam1P29533 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.58□□□□□ -0.24
Vcam1P29533 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.58□□□□□ -0.24
Vcam1P29533 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.58□□□□□ -0.24
Vcam1P29533 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.58□□□□□ -0.24
Vcam1P29533 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcam1P29533 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcam1P29533 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Vcam1P29533 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.57□□□□□ -0.24
Vcam1P29533 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vcam1P29533 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Vcam1P29533 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vcam1P29533 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vcam1P29533 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vcam1P29533 Gm25766-201ENSMUST00000104101 131 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.57□□□□□ -0.24
Vcam1P29533 Gm11675-201ENSMUST00000121873 832 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 Gm16397-201ENSMUST00000122201 494 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.57□□□□□ -0.24
Vcam1P29533 Gm15744-201ENSMUST00000161734 213 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.57□□□□□ -0.24
Vcam1P29533 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vcam1P29533 Gm29155-201ENSMUST00000185910 269 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.57□□□□□ -0.24
Vcam1P29533 Gm37826-201ENSMUST00000195329 322 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.57□□□□□ -0.24
Vcam1P29533 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.57□□□□□ -0.24
Vcam1P29533 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcam1P29533 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.56□□□□□ -0.24
Vcam1P29533 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vcam1P29533 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms