Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp3P28862 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.67□□□□□ -0.38
Mmp3P28862 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Mmp3P28862 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Gm12419-201ENSMUST00000116649 636 ntBASIC12.67□□□□□ -0.38
Mmp3P28862 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Gm10807-201ENSMUST00000177134 795 ntBASIC12.67□□□□□ -0.38
Mmp3P28862 Mir8093-201ENSMUST00000185043 137 ntBASIC12.67□□□□□ -0.38
Mmp3P28862 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Mmp3P28862 Gm37458-201ENSMUST00000194055 410 ntBASIC12.67□□□□□ -0.38
Mmp3P28862 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.67□□□□□ -0.38
Mmp3P28862 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Mmp3P28862 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Mmp3P28862 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.67□□□□□ -0.38
Mmp3P28862 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Mmp3P28862 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Mmp3P28862 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Mmp3P28862 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Mmp3P28862 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.66□□□□□ -0.38
Mmp3P28862 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Gm11451-201ENSMUST00000118946 630 ntBASIC12.66□□□□□ -0.38
Mmp3P28862 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.66□□□□□ -0.38
Mmp3P28862 Gm1848-201ENSMUST00000120711 789 ntBASIC12.66□□□□□ -0.38
Mmp3P28862 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.66□□□□□ -0.38
Mmp3P28862 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Gm44329-201ENSMUST00000197469 112 ntBASIC12.66□□□□□ -0.38
Mmp3P28862 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.66□□□□□ -0.38
Mmp3P28862 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Mmp3P28862 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.66□□□□□ -0.38
Mmp3P28862 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.66□□□□□ -0.38
Mmp3P28862 Olfr584-201ENSMUST00000098210 964 ntBASIC12.66□□□□□ -0.38
Mmp3P28862 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Mmp3P28862 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Mmp3P28862 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Mmp3P28862 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.65□□□□□ -0.38
Mmp3P28862 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms