Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.34□□□□□ -0.43
H2afxP27661 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
H2afxP27661 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.34□□□□□ -0.43
H2afxP27661 Nln-205ENSMUST00000224945 2486 ntBASIC12.34□□□□□ -0.43
H2afxP27661 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H2afxP27661 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H2afxP27661 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afxP27661 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
H2afxP27661 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
H2afxP27661 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afxP27661 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afxP27661 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.33□□□□□ -0.44
H2afxP27661 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H2afxP27661 Gm19165-201ENSMUST00000204453 1982 ntBASIC12.33□□□□□ -0.44
H2afxP27661 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H2afxP27661 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.33□□□□□ -0.44
H2afxP27661 Gm27838-201ENSMUST00000184829 128 ntBASIC12.33□□□□□ -0.44
H2afxP27661 Mir7654-201ENSMUST00000185082 70 ntBASIC12.33□□□□□ -0.44
H2afxP27661 Gm8000-201ENSMUST00000188378 592 ntBASIC12.33□□□□□ -0.44
H2afxP27661 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.33□□□□□ -0.44
H2afxP27661 Gm4768-201ENSMUST00000206199 686 ntBASIC12.33□□□□□ -0.44
H2afxP27661 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.33□□□□□ -0.44
H2afxP27661 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afxP27661 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afxP27661 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afxP27661 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afxP27661 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H2afxP27661 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Gm15321-201ENSMUST00000121290 288 ntBASIC12.32□□□□□ -0.44
H2afxP27661 Gm10156-201ENSMUST00000122364 462 ntBASIC12.32□□□□□ -0.44
H2afxP27661 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.32□□□□□ -0.44
H2afxP27661 Gm2495-201ENSMUST00000191160 466 ntBASIC12.32□□□□□ -0.44
H2afxP27661 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Gm18711-201ENSMUST00000199341 750 ntBASIC12.32□□□□□ -0.44
H2afxP27661 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.32□□□□□ -0.44
H2afxP27661 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.32□□□□□ -0.44
H2afxP27661 Gm39404-201ENSMUST00000216350 313 ntBASIC12.32□□□□□ -0.44
H2afxP27661 Gm5781-201ENSMUST00000219792 443 ntBASIC12.32□□□□□ -0.44
H2afxP27661 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afxP27661 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.32□□□□□ -0.44
H2afxP27661 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms