Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm14017-201ENSMUST00000121934 386 ntBASIC11.01□□□□□ -0.65
Cd40lgP27548 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm2383-201ENSMUST00000181461 807 ntBASIC11.01□□□□□ -0.65
Cd40lgP27548 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.01□□□□□ -0.65
Cd40lgP27548 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.01□□□□□ -0.65
Cd40lgP27548 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm45598-202ENSMUST00000210719 986 ntBASIC11.01□□□□□ -0.65
Cd40lgP27548 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.01□□□□□ -0.65
Cd40lgP27548 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.01□□□□□ -0.65
Cd40lgP27548 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.01□□□□□ -0.65
Cd40lgP27548 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cd40lgP27548 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11□□□□□ -0.65
Cd40lgP27548 Gm11989-201ENSMUST00000117240 672 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm11362-201ENSMUST00000118838 850 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm14277-201ENSMUST00000121195 360 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11□□□□□ -0.65
Cd40lgP27548 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11□□□□□ -0.65
Cd40lgP27548 Gm23119-201ENSMUST00000158610 140 ntBASIC11□□□□□ -0.65
Cd40lgP27548 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11□□□□□ -0.65
Cd40lgP27548 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 Gm25700-201ENSMUST00000177693 110 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 Gm27627-201ENSMUST00000183644 150 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm29199-201ENSMUST00000187766 775 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm8885-201ENSMUST00000189382 598 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm44882-201ENSMUST00000205702 802 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm18056-201ENSMUST00000207670 568 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm18061-201ENSMUST00000208350 562 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm18063-201ENSMUST00000208529 568 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Gm18052-201ENSMUST00000208750 559 ntBASIC11□□□□□ -0.65
Cd40lgP27548 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cd40lgP27548 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Cd40lgP27548 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11□□□□□ -0.65
Cd40lgP27548 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms