Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clk1P22518 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.17□□□□□ -0.62
Clk1P22518 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Clk1P22518 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.17□□□□□ -0.62
Clk1P22518 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Gm11531-201ENSMUST00000117614 555 ntBASIC11.17□□□□□ -0.62
Clk1P22518 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.17□□□□□ -0.62
Clk1P22518 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Gm18711-201ENSMUST00000199341 750 ntBASIC11.17□□□□□ -0.62
Clk1P22518 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Gm42599-201ENSMUST00000201308 469 ntBASIC11.17□□□□□ -0.62
Clk1P22518 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Gm3961-201ENSMUST00000204425 994 ntBASIC11.17□□□□□ -0.62
Clk1P22518 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Clk1P22518 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.17□□□□□ -0.62
Clk1P22518 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Clk1P22518 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Clk1P22518 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.17□□□□□ -0.62
Clk1P22518 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clk1P22518 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.16□□□□□ -0.62
Clk1P22518 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.16□□□□□ -0.62
Clk1P22518 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.16□□□□□ -0.62
Clk1P22518 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Clk1P22518 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Clk1P22518 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.16□□□□□ -0.62
Clk1P22518 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Clk1P22518 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Clk1P22518 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.16□□□□□ -0.62
Clk1P22518 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Clk1P22518 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Clk1P22518 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Clk1P22518 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.16□□□□□ -0.62
Clk1P22518 Gm4034-201ENSMUST00000187674 480 ntBASIC11.16□□□□□ -0.62
Clk1P22518 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.16□□□□□ -0.62
Clk1P22518 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.16□□□□□ -0.62
Clk1P22518 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.16□□□□□ -0.62
Clk1P22518 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.16□□□□□ -0.62
Clk1P22518 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.16□□□□□ -0.62
Clk1P22518 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms