Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp6P0C0A3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm13996-201ENSMUST00000118456 430 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm14017-201ENSMUST00000121934 386 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm27627-201ENSMUST00000183644 150 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm29615-201ENSMUST00000185371 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm28224-201ENSMUST00000186078 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm29001-201ENSMUST00000186177 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm28292-201ENSMUST00000186593 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm28101-201ENSMUST00000187608 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm29076-201ENSMUST00000187689 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm28302-201ENSMUST00000187931 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm28646-201ENSMUST00000188220 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm28205-201ENSMUST00000189177 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm29032-201ENSMUST00000189797 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm28695-201ENSMUST00000190300 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm37448-201ENSMUST00000192795 697 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm18212-201ENSMUST00000211678 889 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp6P0C0A3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp6P0C0A3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms