Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Gm25554-201ENSMUST00000158075 113 ntBASIC15.28■□□□□ 0.04
Hoxc9P09633 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Gm8197-202ENSMUST00000193422 934 ntBASIC15.28■□□□□ 0.04
Hoxc9P09633 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hoxc9P09633 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.28■□□□□ 0.04
Hoxc9P09633 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxc9P09633 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC15.27■□□□□ 0.04
Hoxc9P09633 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxc9P09633 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxc9P09633 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxc9P09633 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxc9P09633 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxc9P09633 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hoxc9P09633 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hoxc9P09633 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxc9P09633 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hoxc9P09633 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxc9P09633 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.27■□□□□ 0.04
Hoxc9P09633 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.27■□□□□ 0.04
Hoxc9P09633 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC15.27■□□□□ 0.04
Hoxc9P09633 Gm9135-201ENSMUST00000182963 990 ntBASIC15.27■□□□□ 0.04
Hoxc9P09633 Gm18514-201ENSMUST00000218980 436 ntBASIC15.27■□□□□ 0.04
Hoxc9P09633 CT030170.2-201ENSMUST00000223267 126 ntBASIC15.27■□□□□ 0.04
Hoxc9P09633 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC15.27■□□□□ 0.04
Hoxc9P09633 Mir483-201ENSMUST00000093631 73 ntBASIC15.27■□□□□ 0.04
Hoxc9P09633 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hoxc9P09633 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Hoxc9P09633 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc9P09633 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
Hoxc9P09633 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc9P09633 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Hoxc9P09633 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15.27■□□□□ 0.03
Hoxc9P09633 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Hoxc9P09633 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc9P09633 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc9P09633 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.26■□□□□ 0.03
Hoxc9P09633 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Gm14807-201ENSMUST00000116640 983 ntBASIC15.26■□□□□ 0.03
Hoxc9P09633 Gm11980-201ENSMUST00000121445 986 ntBASIC15.26■□□□□ 0.03
Hoxc9P09633 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC15.26■□□□□ 0.03
Hoxc9P09633 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15.26■□□□□ 0.03
Hoxc9P09633 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Gm18968-201ENSMUST00000221319 862 ntBASIC15.26■□□□□ 0.03
Hoxc9P09633 AC154176.1-201ENSMUST00000225897 220 ntBASIC15.26■□□□□ 0.03
Hoxc9P09633 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc9P09633 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.26■□□□□ 0.03
Hoxc9P09633 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms