Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.22□□□□□ -0.61
ApoeP08226 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Gm1335-201ENSMUST00000121653 386 ntBASIC11.22□□□□□ -0.61
ApoeP08226 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.22□□□□□ -0.61
ApoeP08226 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.22□□□□□ -0.61
ApoeP08226 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.22□□□□□ -0.61
ApoeP08226 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Gm807-202ENSMUST00000224929 408 ntBASIC11.22□□□□□ -0.61
ApoeP08226 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
ApoeP08226 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
ApoeP08226 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
ApoeP08226 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Gm6091-201ENSMUST00000098307 165 ntBASIC11.22□□□□□ -0.61
ApoeP08226 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ApoeP08226 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ApoeP08226 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
ApoeP08226 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.21□□□□□ -0.61
ApoeP08226 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.21□□□□□ -0.61
ApoeP08226 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
ApoeP08226 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.21□□□□□ -0.61
ApoeP08226 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
ApoeP08226 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Gm14928-201ENSMUST00000120198 477 ntBASIC11.21□□□□□ -0.61
ApoeP08226 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.21□□□□□ -0.61
ApoeP08226 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
ApoeP08226 Gm7809-201ENSMUST00000153199 742 ntBASIC11.21□□□□□ -0.61
ApoeP08226 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.21□□□□□ -0.61
ApoeP08226 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Gm3890-201ENSMUST00000182416 207 ntBASIC11.21□□□□□ -0.61
ApoeP08226 Gm6114-201ENSMUST00000182472 968 ntBASIC11.21□□□□□ -0.61
ApoeP08226 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.21□□□□□ -0.61
ApoeP08226 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.21□□□□□ -0.61
ApoeP08226 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.21□□□□□ -0.61
ApoeP08226 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
ApoeP08226 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ApoeP08226 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
ApoeP08226 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
ApoeP08226 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ApoeP08226 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms