Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
PrnpP04925 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PrnpP04925 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.27□□□□□ -0.45
PrnpP04925 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PrnpP04925 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
PrnpP04925 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrnpP04925 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.26□□□□□ -0.45
PrnpP04925 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PrnpP04925 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
PrnpP04925 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Gm14892-201ENSMUST00000117636 267 ntBASIC12.26□□□□□ -0.45
PrnpP04925 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.26□□□□□ -0.45
PrnpP04925 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.26□□□□□ -0.45
PrnpP04925 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.26□□□□□ -0.45
PrnpP04925 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.26□□□□□ -0.45
PrnpP04925 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.26□□□□□ -0.45
PrnpP04925 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.26□□□□□ -0.45
PrnpP04925 Gm3619-201ENSMUST00000219947 775 ntBASIC12.26□□□□□ -0.45
PrnpP04925 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PrnpP04925 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Gm4978-201ENSMUST00000071565 801 ntBASIC12.26□□□□□ -0.45
PrnpP04925 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PrnpP04925 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PrnpP04925 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
PrnpP04925 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PrnpP04925 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrnpP04925 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PrnpP04925 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PrnpP04925 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.25□□□□□ -0.45
PrnpP04925 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.25□□□□□ -0.45
PrnpP04925 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.25□□□□□ -0.45
PrnpP04925 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
PrnpP04925 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.25□□□□□ -0.45
PrnpP04925 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.25□□□□□ -0.45
PrnpP04925 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.25□□□□□ -0.45
PrnpP04925 Gm25951-201ENSMUST00000175330 64 ntBASIC12.25□□□□□ -0.45
PrnpP04925 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.25□□□□□ -0.45
PrnpP04925 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
PrnpP04925 Gm7504-201ENSMUST00000201449 424 ntBASIC12.25□□□□□ -0.45
PrnpP04925 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
PrnpP04925 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.25□□□□□ -0.45
PrnpP04925 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.25□□□□□ -0.45
PrnpP04925 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.25□□□□□ -0.45
PrnpP04925 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.25□□□□□ -0.45
PrnpP04925 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
PrnpP04925 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PrnpP04925 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.25□□□□□ -0.45
PrnpP04925 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.25□□□□□ -0.45
PrnpP04925 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrnpP04925 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms