Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
P04224 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.42□□□□□ -0.74
P04224 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.42□□□□□ -0.74
P04224 Spata33-207ENSMUST00000212760 4074 ntBASIC10.42□□□□□ -0.74
P04224 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.42□□□□□ -0.74
P04224 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
P04224 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.42□□□□□ -0.74
P04224 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.41□□□□□ -0.74
P04224 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.41□□□□□ -0.74
P04224 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
P04224 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.41□□□□□ -0.74
P04224 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
P04224 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
P04224 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Gm15703-201ENSMUST00000120250 880 ntBASIC10.41□□□□□ -0.74
P04224 Rmrp-201ENSMUST00000157463 271 ntBASIC10.41□□□□□ -0.74
P04224 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.41□□□□□ -0.74
P04224 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.41□□□□□ -0.74
P04224 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
P04224 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.41□□□□□ -0.74
P04224 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Gm37497-201ENSMUST00000195830 798 ntBASIC10.41□□□□□ -0.74
P04224 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.41□□□□□ -0.74
P04224 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.41□□□□□ -0.74
P04224 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.41□□□□□ -0.74
P04224 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
P04224 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.41□□□□□ -0.74
P04224 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
P04224 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
P04224 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.41□□□□□ -0.74
P04224 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P04224 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
P04224 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.4□□□□□ -0.74
P04224 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.4□□□□□ -0.74
P04224 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
P04224 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.4□□□□□ -0.74
P04224 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.4□□□□□ -0.74
P04224 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms