Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.39□□□□□ -0.59
Hcn1O88704 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.39□□□□□ -0.59
Hcn1O88704 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hcn1O88704 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm44967-201ENSMUST00000207047 631 ntBASIC11.39□□□□□ -0.59
Hcn1O88704 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.39□□□□□ -0.59
Hcn1O88704 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hcn1O88704 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Hcn1O88704 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hcn1O88704 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hcn1O88704 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.38□□□□□ -0.59
Hcn1O88704 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hcn1O88704 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hcn1O88704 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hcn1O88704 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.38□□□□□ -0.59
Hcn1O88704 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.38□□□□□ -0.59
Hcn1O88704 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hcn1O88704 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.38□□□□□ -0.59
Hcn1O88704 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm13665-201ENSMUST00000120830 528 ntBASIC11.38□□□□□ -0.59
Hcn1O88704 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.38□□□□□ -0.59
Hcn1O88704 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.38□□□□□ -0.59
Hcn1O88704 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hcn1O88704 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.38□□□□□ -0.59
Hcn1O88704 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.38□□□□□ -0.59
Hcn1O88704 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.38□□□□□ -0.59
Hcn1O88704 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Hcn1O88704 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hcn1O88704 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.38□□□□□ -0.59
Hcn1O88704 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.38□□□□□ -0.59
Hcn1O88704 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcn1O88704 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Hcn1O88704 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm24934-201ENSMUST00000103764 111 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms