Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.79□□□□□ -0.52
Ldb2O55203 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.79□□□□□ -0.52
Ldb2O55203 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.79□□□□□ -0.52
Ldb2O55203 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Gm18827-201ENSMUST00000188341 790 ntBASIC11.79□□□□□ -0.52
Ldb2O55203 Gm28071-201ENSMUST00000190355 478 ntBASIC11.79□□□□□ -0.52
Ldb2O55203 Gm43184-201ENSMUST00000197247 542 ntBASIC11.79□□□□□ -0.52
Ldb2O55203 Gm18038-201ENSMUST00000197900 485 ntBASIC11.79□□□□□ -0.52
Ldb2O55203 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ldb2O55203 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.79□□□□□ -0.52
Ldb2O55203 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.79□□□□□ -0.52
Ldb2O55203 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ldb2O55203 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ldb2O55203 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ldb2O55203 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ldb2O55203 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Ldb2O55203 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.78□□□□□ -0.52
Ldb2O55203 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ldb2O55203 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ldb2O55203 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.78□□□□□ -0.52
Ldb2O55203 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ldb2O55203 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Ldb2O55203 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ldb2O55203 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Gm11700-201ENSMUST00000119409 403 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 Gm12997-201ENSMUST00000120207 640 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ldb2O55203 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Ldb2O55203 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Gm4310-201ENSMUST00000177847 889 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.78□□□□□ -0.52
Ldb2O55203 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Gm26448-201ENSMUST00000082446 203 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.78□□□□□ -0.52
Ldb2O55203 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ldb2O55203 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ldb2O55203 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.78□□□□□ -0.52
Ldb2O55203 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ldb2O55203 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ldb2O55203 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Ldb2O55203 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ldb2O55203 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ldb2O55203 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ldb2O55203 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ldb2O55203 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.77□□□□□ -0.52
Ldb2O55203 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ldb2O55203 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.77□□□□□ -0.53
Ldb2O55203 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ldb2O55203 Gm14208-201ENSMUST00000119645 678 ntBASIC11.77□□□□□ -0.53
Ldb2O55203 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.77□□□□□ -0.53
Ldb2O55203 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.77□□□□□ -0.53
Ldb2O55203 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ldb2O55203 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ldb2O55203 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ldb2O55203 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms