Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trdmt1O55055 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trdmt1O55055 Gm12990-201ENSMUST00000120372 468 ntBASIC13.04□□□□□ -0.32
Trdmt1O55055 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.04□□□□□ -0.32
Trdmt1O55055 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.04□□□□□ -0.32
Trdmt1O55055 Gm7741-201ENSMUST00000181445 989 ntBASIC13.04□□□□□ -0.32
Trdmt1O55055 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.04□□□□□ -0.32
Trdmt1O55055 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.04□□□□□ -0.32
Trdmt1O55055 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Gm4978-201ENSMUST00000071565 801 ntBASIC13.04□□□□□ -0.32
Trdmt1O55055 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trdmt1O55055 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Trdmt1O55055 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.04□□□□□ -0.32
Trdmt1O55055 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trdmt1O55055 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdmt1O55055 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trdmt1O55055 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Gm14892-201ENSMUST00000117636 267 ntBASIC13.03□□□□□ -0.32
Trdmt1O55055 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trdmt1O55055 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.03□□□□□ -0.32
Trdmt1O55055 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.03□□□□□ -0.32
Trdmt1O55055 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.03□□□□□ -0.32
Trdmt1O55055 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Trdmt1O55055 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdmt1O55055 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trdmt1O55055 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdmt1O55055 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trdmt1O55055 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.02□□□□□ -0.32
Trdmt1O55055 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdmt1O55055 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdmt1O55055 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdmt1O55055 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdmt1O55055 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.02□□□□□ -0.32
Trdmt1O55055 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdmt1O55055 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trdmt1O55055 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Gm12030-201ENSMUST00000121917 223 ntBASIC13.02□□□□□ -0.33
Trdmt1O55055 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.02□□□□□ -0.33
Trdmt1O55055 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.02□□□□□ -0.33
Trdmt1O55055 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 Cog3-203ENSMUST00000227473 4197 ntBASIC13.02□□□□□ -0.33
Trdmt1O55055 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdmt1O55055 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.02□□□□□ -0.33
Trdmt1O55055 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms