Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm11597-201ENSMUST00000121423 964 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm2495-201ENSMUST00000191160 466 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm37935-201ENSMUST00000192012 982 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm37917-201ENSMUST00000194711 392 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm18624-201ENSMUST00000220966 658 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm8598-201ENSMUST00000221184 836 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm5867-201ENSMUST00000063197 592 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.78□□□□□ -0.84
Hmgb3O54879 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.78□□□□□ -0.84
Hmgb3O54879 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgb3O54879 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Hmgb3O54879 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Hmgb3O54879 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Hmgb3O54879 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Gm9083-201ENSMUST00000120423 819 ntBASIC9.77□□□□□ -0.85
Hmgb3O54879 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Proscos-202ENSMUST00000178990 666 ntBASIC9.77□□□□□ -0.85
Hmgb3O54879 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.77□□□□□ -0.85
Hmgb3O54879 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Hmgb3O54879 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.77□□□□□ -0.85
Hmgb3O54879 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgb3O54879 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.77□□□□□ -0.85
Hmgb3O54879 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms