Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.61□□□□□ -1.03
CrxO54751 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC8.61□□□□□ -1.03
CrxO54751 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC8.61□□□□□ -1.03
CrxO54751 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
CrxO54751 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CrxO54751 Gm43375-201ENSMUST00000196705 2480 ntBASIC8.61□□□□□ -1.03
CrxO54751 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CrxO54751 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 AC138329.2-201ENSMUST00000225579 1842 ntBASIC8.61□□□□□ -1.03
CrxO54751 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.61□□□□□ -1.03
CrxO54751 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
CrxO54751 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
CrxO54751 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
CrxO54751 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CrxO54751 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CrxO54751 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CrxO54751 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CrxO54751 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC8.6□□□□□ -1.03
CrxO54751 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
CrxO54751 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC8.6□□□□□ -1.03
CrxO54751 Gm12291-201ENSMUST00000121627 311 ntBASIC8.6□□□□□ -1.03
CrxO54751 Gm15376-201ENSMUST00000122258 783 ntBASIC8.6□□□□□ -1.03
CrxO54751 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.6□□□□□ -1.03
CrxO54751 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.6□□□□□ -1.03
CrxO54751 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC8.6□□□□□ -1.03
CrxO54751 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC8.6□□□□□ -1.03
CrxO54751 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC8.6□□□□□ -1.03
CrxO54751 AC073947.2-201ENSMUST00000215888 1130 ntBASIC8.6□□□□□ -1.03
CrxO54751 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Gm20445-201ENSMUST00000061905 565 ntBASIC8.6□□□□□ -1.03
CrxO54751 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.6□□□□□ -1.03
CrxO54751 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CrxO54751 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CrxO54751 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms