Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Btrc-209ENSMUST00000224478 2194 ntBASIC9.38□□□□□ -0.91
Efnb3O35393 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Efnb3O35393 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.38□□□□□ -0.91
Efnb3O35393 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
Efnb3O35393 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.37□□□□□ -0.91
Efnb3O35393 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Efnb3O35393 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.37□□□□□ -0.91
Efnb3O35393 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.37□□□□□ -0.91
Efnb3O35393 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.37□□□□□ -0.91
Efnb3O35393 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.37□□□□□ -0.91
Efnb3O35393 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.37□□□□□ -0.91
Efnb3O35393 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.37□□□□□ -0.91
Efnb3O35393 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Efnb3O35393 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC9.37□□□□□ -0.91
Efnb3O35393 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 AY702102-202ENSMUST00000194651 1173 ntBASIC9.37□□□□□ -0.91
Efnb3O35393 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.37□□□□□ -0.91
Efnb3O35393 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.37□□□□□ -0.91
Efnb3O35393 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.37□□□□□ -0.91
Efnb3O35393 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Efnb3O35393 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.36□□□□□ -0.91
Efnb3O35393 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.36□□□□□ -0.91
Efnb3O35393 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Efnb3O35393 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.36□□□□□ -0.91
Efnb3O35393 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Efnb3O35393 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Efnb3O35393 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.36□□□□□ -0.91
Efnb3O35393 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Efnb3O35393 Gm5706-201ENSMUST00000181525 993 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms