Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.59□□□□□ -0.71
Alx4O35137 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Alx4O35137 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Alx4O35137 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.58□□□□□ -0.72
Alx4O35137 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Alx4O35137 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.58□□□□□ -0.72
Alx4O35137 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.58□□□□□ -0.72
Alx4O35137 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.58□□□□□ -0.72
Alx4O35137 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.58□□□□□ -0.72
Alx4O35137 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.58□□□□□ -0.72
Alx4O35137 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.58□□□□□ -0.72
Alx4O35137 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.58□□□□□ -0.72
Alx4O35137 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Alx4O35137 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Alx4O35137 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.58□□□□□ -0.72
Alx4O35137 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Alx4O35137 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Alx4O35137 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Alx4O35137 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Alx4O35137 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Gm11478-201ENSMUST00000117851 599 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Gm11960-201ENSMUST00000122068 925 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.57□□□□□ -0.72
Alx4O35137 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.57□□□□□ -0.72
Alx4O35137 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Gm24845-201ENSMUST00000158034 109 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Alx4O35137 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Gm2546-201ENSMUST00000182630 991 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.57□□□□□ -0.72
Alx4O35137 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Alx4O35137 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms