Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf11bO08712 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Gm11960-201ENSMUST00000122068 925 ntBASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Gm38314-201ENSMUST00000195709 625 ntBASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Gm43002-201ENSMUST00000200310 155 ntBASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Gm8956-201ENSMUST00000203939 825 ntBASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Gm5455-201ENSMUST00000058710 715 ntBASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Gm8420-201ENSMUST00000097103 598 ntBASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Rgr-203ENSMUST00000225070 4704 ntBASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf11bO08712 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.01□□□□□ -0.49
Tnfrsf11bO08712 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12□□□□□ -0.49
Tnfrsf11bO08712 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms