Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm22323-201ENSMUST00000103832 109 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm13296-201ENSMUST00000117854 997 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm13350-201ENSMUST00000120519 479 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm17376-201ENSMUST00000166016 84 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm27320-201ENSMUST00000184892 109 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Gm38241-201ENSMUST00000192641 898 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.2□□□□□ -0.46
Atf6F6VAN0 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.2□□□□□ -0.46
Atf6F6VAN0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6F6VAN0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.19□□□□□ -0.46
Atf6F6VAN0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.19□□□□□ -0.46
Atf6F6VAN0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.19□□□□□ -0.46
Atf6F6VAN0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gm14441-201ENSMUST00000121960 540 ntBASIC12.19□□□□□ -0.46
Atf6F6VAN0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gm8956-201ENSMUST00000203939 825 ntBASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gm44967-201ENSMUST00000207047 631 ntBASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atf6F6VAN0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.19□□□□□ -0.46
Atf6F6VAN0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6F6VAN0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.18□□□□□ -0.46
Atf6F6VAN0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gm13665-201ENSMUST00000120830 528 ntBASIC12.18□□□□□ -0.46
Atf6F6VAN0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms