Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm10608-202ENSMUST00000213924 676 ntBASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.92□□□□□ -0.5
Gm28043E0CXC2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm15370-201ENSMUST00000117158 253 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm14716-201ENSMUST00000120138 718 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm14999-201ENSMUST00000121039 624 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm5950-201ENSMUST00000213337 772 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms