Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Gm31274-201ENSMUST00000197356 229 ntBASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Gm8768-201ENSMUST00000220020 826 ntBASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col4a6B1AVK5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col4a6B1AVK5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Mir453-201ENSMUST00000104732 82 ntBASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Gm11996-201ENSMUST00000117538 915 ntBASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.96□□□□□ -0.5
Col4a6B1AVK5 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.96□□□□□ -0.5
Col4a6B1AVK5 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.96□□□□□ -0.5
Col4a6B1AVK5 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col4a6B1AVK5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Gm15617-201ENSMUST00000118973 771 ntBASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Gm14165-201ENSMUST00000121456 952 ntBASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Gm25569-201ENSMUST00000157175 131 ntBASIC11.95□□□□□ -0.5
Col4a6B1AVK5 Gm25677-201ENSMUST00000174983 72 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 130.7 ms