Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc112A0AUP1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc112A0AUP1 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Gm43433-201ENSMUST00000196573 481 ntBASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Gm30285-201ENSMUST00000214614 422 ntBASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc112A0AUP1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Gm15547-201ENSMUST00000122152 333 ntBASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc112A0AUP1 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Gm11960-201ENSMUST00000122068 925 ntBASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms