Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smim17A0A504 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim17A0A504 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smim17A0A504 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smim17A0A504 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smim17A0A504 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Smim17A0A504 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.7□□□□□ -0.7
Smim17A0A504 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smim17A0A504 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Smim17A0A504 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smim17A0A504 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Smim17A0A504 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.7□□□□□ -0.7
Smim17A0A504 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.7□□□□□ -0.7
Smim17A0A504 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smim17A0A504 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.7□□□□□ -0.7
Smim17A0A504 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smim17A0A504 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.7□□□□□ -0.7
Smim17A0A504 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Smim17A0A504 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smim17A0A504 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.7□□□□□ -0.7
Smim17A0A504 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.7□□□□□ -0.7
Smim17A0A504 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.7□□□□□ -0.7
Smim17A0A504 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.7□□□□□ -0.7
Smim17A0A504 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.7□□□□□ -0.7
Smim17A0A504 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smim17A0A504 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.69□□□□□ -0.7
Smim17A0A504 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Smim17A0A504 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Smim17A0A504 Gm21854-201ENSMUST00000179901 471 ntBASIC10.69□□□□□ -0.7
Smim17A0A504 Gm27306-201ENSMUST00000183970 107 ntBASIC10.69□□□□□ -0.7
Smim17A0A504 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smim17A0A504 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smim17A0A504 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smim17A0A504 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.68□□□□□ -0.7
Smim17A0A504 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Smim17A0A504 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim17A0A504 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smim17A0A504 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.68□□□□□ -0.7
Smim17A0A504 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms