Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfap99A0A140LIX9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Gm15881-201ENSMUST00000148792 942 ntBASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Gm8100-201ENSMUST00000182906 988 ntBASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Gm4157-201ENSMUST00000211647 679 ntBASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfap99A0A140LIX9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Mir6546-201ENSMUST00000184460 62 ntBASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm10774-201ENSMUST00000188689 204 ntBASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfap99A0A140LIX9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cfap99A0A140LIX9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.18□□□□□ -0.14
Cfap99A0A140LIX9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cfap99A0A140LIX9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms