Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Mir339-201ENSMUST00000083659 96 ntBASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm18227-201ENSMUST00000211082 1468 ntBASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm45206-201ENSMUST00000206885 2285 ntBASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav6n-6A0A075B6B2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm11439-201ENSMUST00000118598 409 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm9431-201ENSMUST00000119765 1051 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm6652-201ENSMUST00000186414 1070 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm37008-201ENSMUST00000195712 319 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm5781-201ENSMUST00000219792 443 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 AC022775.2-201ENSMUST00000227885 646 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Snora73a-201ENSMUST00000082453 205 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 n-R5s195-201ENSMUST00000082891 119 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm24526-201ENSMUST00000082921 158 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm7537-201ENSMUST00000221660 1414 ntBASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav6n-6A0A075B6B2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms