Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RpgrQ9R0X5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm14381-201ENSMUST00000122105 414 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm15547-201ENSMUST00000122152 333 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm25043-201ENSMUST00000158604 212 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm2991-201ENSMUST00000173338 480 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm43179-201ENSMUST00000198797 275 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm43822-201ENSMUST00000200285 476 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm30285-201ENSMUST00000214614 422 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RpgrQ9R0X5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Gm13875-201ENSMUST00000120162 282 ntBASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Gm5950-201ENSMUST00000213337 772 ntBASIC12.1□□□□□ -0.47
RpgrQ9R0X5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms