Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm22920-201ENSMUST00000102175 109 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm22144-201ENSMUST00000157402 102 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm38314-201ENSMUST00000195709 625 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm13899-201ENSMUST00000121519 1255 ntBASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm11960-201ENSMUST00000122068 925 ntBASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm10807-201ENSMUST00000177134 795 ntBASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm43974-201ENSMUST00000205080 684 ntBASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm6108-201ENSMUST00000208365 367 ntBASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube3bQ9ES34 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube3bQ9ES34 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms