Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-4Q9EQM3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm11996-201ENSMUST00000117538 915 ntBASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm11500-201ENSMUST00000118237 601 ntBASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm7741-201ENSMUST00000181445 989 ntBASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm43163-201ENSMUST00000196571 442 ntBASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-4Q9EQM3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm12663-201ENSMUST00000118481 958 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm28937-201ENSMUST00000185413 695 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm29400-201ENSMUST00000187208 695 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm28662-201ENSMUST00000188446 695 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm28251-201ENSMUST00000188835 695 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm37318-201ENSMUST00000194325 695 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm38017-201ENSMUST00000194768 695 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm37287-201ENSMUST00000195449 695 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm37793-201ENSMUST00000195548 695 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Gm42511-201ENSMUST00000196160 234 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms