Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdc40Q9DC48 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdc40Q9DC48 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdc40Q9DC48 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdc40Q9DC48 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdc40Q9DC48 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdc40Q9DC48 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdc40Q9DC48 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.07□□□□□ -0.64
Cdc40Q9DC48 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm9230-201ENSMUST00000188228 532 ntBASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm18711-201ENSMUST00000199341 750 ntBASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm9996-201ENSMUST00000070359 913 ntBASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdc40Q9DC48 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gm14263-201ENSMUST00000117955 746 ntBASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gm7003-201ENSMUST00000195089 312 ntBASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms